Dr. Patrick Trampert
July 27, 2012 2023-11-10 11:17Dr. Patrick Trampert
Researcher
Former Researcher
Patrick Trampert is now working at ZF Group Saarbrücken.
Contact
Chair for Bioinformatics Saarbrücken
Center for Bioinformatics
Saarland Informatics Campus
Saarland University
Building E2.1, Room 402
P.O. Box 15 11 50
66041 Saarbrücken
Germany
Education
- Allgemeine Hochschulreife, Ludwigsgymnasium Saarbrücken, Juni 2002
- Job Training as IT Specialist Systemintegration
- Prediploma Mathematics, Saarland University, November 2006
- “Prepedagogium” Educational Sciences, Saarland University, June 2007
- Bachelor of Science (Computer Sciences), Saarland University, February 2010
- Master of Science (Computer Sciences),Saarland University, February 2012
Teaching
Tutor
- Linear Algebra I
- Programming I, II
- Programming for Mathematicians
- Preparatory Course: Mathematics for Computer Scientists
- Mathematics for Computer Scientists I, II, III
- Systemarchitecture
- Mathmetical Optimization
- Euclidian Geometry
Teaching Assistant
- Didactics I: Introduction to Mathematics Education: WS07/08
- Bioinformatics I : WS12/13, WS13/14
- Bioinformatics II : SS12, SS13, SS14
- Proseminar “Bioinformatic Approaches for Cancer Research”: SS12, WS12/13, SS13, WS13/14, SS14
- Proseminar “Efficient Algorithms for RNA molecules”: SS12
- Seminar “Inferring Network Structure from Data”: SS13, WS13/14, SS14
- Seminar “Modelling and Analyzing Biological Networks”: WS12/13
Teaching
- Preparatory Course: Probability Theory and Statistics for Bioinformaticians: SS11
Supervisor
- Florian Schmidt, Bachelor (finished)
- Title: “Identification of deregulated paths in metabolic networks”
- Tim Kehl, Bachelor (finished)
- Title: “PiDGEon: A Next-Generation-Sequencing Pipeline to detect differential gene expression.”
- Sebastian Schattner, Bachelor (finished)
- Title: “Batch Processing Library for Biological Images with Graphical User Interface.”
- Nima Zeini, Master
- Title: “TBA”
- Sven Hafeneger, Master (finished)
- Title: “Determine Surivival-related Biomarkers using Undirected Graphical Models”
- Robert Kirsten, Master
- Title: “Construction of causal interaction networks using multiple mRNA microarray experiments.”
- Christine Jaeckels, Master
- Title: “TBA”
- Christina Kiefer, Bachelor
- Title: “RNA Chemical Shift Prediction”
- Valentina Galata, Master (finished)
- Title: “Incorporation of Prior Knowledge into Structure Learning of Causal Bayesian Networks”
- Tim Kehl, Master
- Working Title: “GeneTrail 2”
- Florian Schmidt, Master
- Title: “TBA”
- Julia Jauss, Bachelor
- Title: “TBA”
Latest Publications
[SKT+16] Stöckel, D., Kehl, T., Trampert, P., Schneider, L., Backes, C., Ludwig, N., Gerasch, A., Kaufmann, M., Gessler, M., Graf, N., Meese, E., Keller, A., Lenhof, H.P.,: Multi-omics Enrichment Analysis using the GeneTrail2 Web Service. Bioinformatics 2016; doi: 10.1093/bioinformatics/btv770
[SST+15] Stöckel, D., Schmidt, F., Trampert, P., and Lenhof, H.-P.: CausalTrail: Testing hypothesis using causal Bayesian networks. F1000Research 2015, 4(ISCB Comm J):1520, doi: 10.12688/f1000research.7647.1
